Abstract 21P
Background
Liquid biopsy biomarkers are important for early cancer screening. However, the available samples are usually from patients who have been clinically diagnosed, resulting in relatively higher tumor burdens compared to the point-of-care population for cancer screening. Due to this tumor burden spectrum bias, those biomarkers may significantly lose their screening efficacy in early cancer detection.
Methods
We provided a statistical model of biomarker distribution along with tumor burden based on the Tumor-derived Biomarker Circulation Model (TBCM). According to the observed sample with high tumor burden, we estimated and thereafter optimized the diagnostic efficacy of biomarker panel under given low tumor burden distribution. We test our method via simulated data based on literature of lung cancer and renal cancer. The efficacies of biomarker panels were measured using the area under the receiver operating curve (AUROC), sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV). Tumor burden spectrum bias was estimated comparing the efficacy measures between the observed samples and the target screening population. Additionally, we compared the efficacy measures of biomarker panels obtained from our method against those from traditional methods.
Results
For lung cancer, the traditional biomarker panel had AUC 0.881 among observed samples, which decreased into AUC 0.675 among target screening population. Our improved biomarker panel achieved AUC 0.752 among target screening population. For renal cancer, the traditional biomarker panel had AUC 0.937 among observed samples, which decreased into AUC 0.581 among target screening population. Our improved biomarker panel achieved AUC 0.711 among target screening population.
Conclusions
Tumor burden spectrum bias is a significant factor contributing to the failure of liquid biopsy biomarkers in early cancer screening. Our method can correctly adjust this bias and substantially improve the efficacy of biomarkers in the target screening population.
Editorial acknowledgement
Clinical trial identification
Legal entity responsible for the study
The author.
Funding
National Natural Science Foundation of China.
Disclosure
The author has declared no conflicts of interest.
Resources from the same session
83P - Development of a cell-free DNA scoring system from organoid culture medium to predict drug response in bladder cancer
Presenter: Tingting Xie
Session: Cocktail & Poster Display session
Resources:
Abstract
84P - Quinacrine inhibits angiogenesis and migration of non-small cells lung cancer cells (NSCLC) by binding with the kinase domain of VEGFR2
Presenter: Angshuman Sarkar
Session: Cocktail & Poster Display session
Resources:
Abstract
85P - HDAC6-mediated regulation of progesterone receptor: Implications for hormonal therapy in breast cancer
Presenter: Wafaa Ramadan
Session: Cocktail & Poster Display session
Resources:
Abstract
86P - Functional impact of miR-205-5p on cervical cancer cell behavior and chemotherapy response
Presenter: Rhafaela Causin
Session: Cocktail & Poster Display session
Resources:
Abstract
88P - Impact of poly(ADP-ribose) polymerase (PARP) mutations on interaction with PARP inhibitors (iPARPs)
Presenter: JUAN DIAZ ACOSTA
Session: Cocktail & Poster Display session
Resources:
Abstract
89P - Epstein-Barr virus-positive and Epstein-Barr virus-negative nasopharyngeal carcinoma in multicellular spheroid model
Presenter: Shiau Chuen Cheah
Session: Cocktail & Poster Display session
Resources:
Abstract
90P - Clinical phenotyping of lung cancer-associated cachexia in relation to tumour volume in TRACERx
Presenter: Kexin Koh
Session: Cocktail & Poster Display session
Resources:
Abstract
91P - Are patients with measurable residual disease (MRD) positive or MRD negative different in baseline DNA methylation signatures in precursor B-cell acute lymphoblastic leukaemia (B-ALL)?
Presenter: Ramya Ramesh
Session: Cocktail & Poster Display session
Resources:
Abstract
92P - Prognostic value of tumor location and site-specific metastases in advanced biliary tract cancer
Presenter: Vanessa Patel
Session: Cocktail & Poster Display session
Resources:
Abstract
94P - Clinical utility of long read sequencing for comprehensive analysis of cancer patient genomes
Presenter: Rowan Howell
Session: Cocktail & Poster Display session
Resources:
Abstract