Abstract 21P
Background
Liquid biopsy biomarkers are important for early cancer screening. However, the available samples are usually from patients who have been clinically diagnosed, resulting in relatively higher tumor burdens compared to the point-of-care population for cancer screening. Due to this tumor burden spectrum bias, those biomarkers may significantly lose their screening efficacy in early cancer detection.
Methods
We provided a statistical model of biomarker distribution along with tumor burden based on the Tumor-derived Biomarker Circulation Model (TBCM). According to the observed sample with high tumor burden, we estimated and thereafter optimized the diagnostic efficacy of biomarker panel under given low tumor burden distribution. We test our method via simulated data based on literature of lung cancer and renal cancer. The efficacies of biomarker panels were measured using the area under the receiver operating curve (AUROC), sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV). Tumor burden spectrum bias was estimated comparing the efficacy measures between the observed samples and the target screening population. Additionally, we compared the efficacy measures of biomarker panels obtained from our method against those from traditional methods.
Results
For lung cancer, the traditional biomarker panel had AUC 0.881 among observed samples, which decreased into AUC 0.675 among target screening population. Our improved biomarker panel achieved AUC 0.752 among target screening population. For renal cancer, the traditional biomarker panel had AUC 0.937 among observed samples, which decreased into AUC 0.581 among target screening population. Our improved biomarker panel achieved AUC 0.711 among target screening population.
Conclusions
Tumor burden spectrum bias is a significant factor contributing to the failure of liquid biopsy biomarkers in early cancer screening. Our method can correctly adjust this bias and substantially improve the efficacy of biomarkers in the target screening population.
Editorial acknowledgement
Clinical trial identification
Legal entity responsible for the study
The author.
Funding
National Natural Science Foundation of China.
Disclosure
The author has declared no conflicts of interest.
Resources from the same session
26P - Predictive biomarker discovery for ICI treatment response in metastatic MMRd endometrial cancer through deep proteomic profiling of FFPE tissue samples
Presenter: Juan Francisco Grau-Béjar
Session: Cocktail & Poster Display session
Resources:
Abstract
27P - Analytical validation of a small amplicon NGS panel for MSI detection
Presenter: Alexandra Lebedeva
Session: Cocktail & Poster Display session
Resources:
Abstract
28P - Clinical significance of TROP2 expression in lung adenocarcinomas
Presenter: Kazuya Takamochi
Session: Cocktail & Poster Display session
Resources:
Abstract
29P - PTEN/CREBBP/NOTCH1 co-alterations with TP53/RB1 define molecular subtypes associated with primary therapy resistance in small cell lung cancer (SCLC)
Presenter: Louisa Hempel
Session: Cocktail & Poster Display session
Resources:
Abstract
30P - Role of suppressor of cytokine signalling 6 (SOCS6) in colorectal cancer pathogenesis: Integrating clinical and molecular perspectives
Presenter: Asma Al- Bahri
Session: Cocktail & Poster Display session
Resources:
Abstract
31P - Adult granulosa cell tumours of ovary: Analysis of 227 non-recurrent and recurrent cases
Presenter: Jan Hojný
Session: Cocktail & Poster Display session
Resources:
Abstract
32P - Clinical evaluation cancer testis antigen 45 (CT45) expression in ovarian cancer
Presenter: Harshita Dubey
Session: Cocktail & Poster Display session
Resources:
Abstract
33P - Molecular-genetic concordance of the primary tumor and brain metastases of colorectal cancer (GENCONCOR-1)
Presenter: David Halafyan
Session: Cocktail & Poster Display session
Resources:
Abstract
34P - A prognostic signature to predict recurrence in patients with residual disease in triple-negative breast cancer: NACATRINE trial
Presenter: Ana Julia de Freitas
Session: Cocktail & Poster Display session
Resources:
Abstract
35P - Whole exome sequencing reveals high frequency of Notch pathway mutations in Indian breast cancer cases
Presenter: Harsh Goel
Session: Cocktail & Poster Display session
Resources:
Abstract