Abstract 21P
Background
Liquid biopsy biomarkers are important for early cancer screening. However, the available samples are usually from patients who have been clinically diagnosed, resulting in relatively higher tumor burdens compared to the point-of-care population for cancer screening. Due to this tumor burden spectrum bias, those biomarkers may significantly lose their screening efficacy in early cancer detection.
Methods
We provided a statistical model of biomarker distribution along with tumor burden based on the Tumor-derived Biomarker Circulation Model (TBCM). According to the observed sample with high tumor burden, we estimated and thereafter optimized the diagnostic efficacy of biomarker panel under given low tumor burden distribution. We test our method via simulated data based on literature of lung cancer and renal cancer. The efficacies of biomarker panels were measured using the area under the receiver operating curve (AUROC), sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV). Tumor burden spectrum bias was estimated comparing the efficacy measures between the observed samples and the target screening population. Additionally, we compared the efficacy measures of biomarker panels obtained from our method against those from traditional methods.
Results
For lung cancer, the traditional biomarker panel had AUC 0.881 among observed samples, which decreased into AUC 0.675 among target screening population. Our improved biomarker panel achieved AUC 0.752 among target screening population. For renal cancer, the traditional biomarker panel had AUC 0.937 among observed samples, which decreased into AUC 0.581 among target screening population. Our improved biomarker panel achieved AUC 0.711 among target screening population.
Conclusions
Tumor burden spectrum bias is a significant factor contributing to the failure of liquid biopsy biomarkers in early cancer screening. Our method can correctly adjust this bias and substantially improve the efficacy of biomarkers in the target screening population.
Editorial acknowledgement
Clinical trial identification
Legal entity responsible for the study
The author.
Funding
National Natural Science Foundation of China.
Disclosure
The author has declared no conflicts of interest.
Resources from the same session
36P - Abacavir potentiates the efficacy of doxorubicin in breast cancer cells via KDM5B Inhibition
Presenter: Anmi Jose
Session: Cocktail & Poster Display session
Resources:
Abstract
37P - Identification of immune profile in advanced cutaneous squamous cell carcinoma predicting immunotherapy response
Presenter: Alfonso Esposito
Session: Cocktail & Poster Display session
Resources:
Abstract
39P - MicroRNA as a promising molecular biomarker for liquid biopsy in breast cancer
Presenter: Giorgia Vesca
Session: Cocktail & Poster Display session
Resources:
Abstract
40P - Patient-based models to study infiltration heterogeneity in gliomas
Presenter: Ivana Manini
Session: Cocktail & Poster Display session
Resources:
Abstract
42P - HER2 aberration as a potential predictive biomarker for extrapulmonary small cell neuroendocrine carcinoma
Presenter: Jiri Dvorak
Session: Cocktail & Poster Display session
Resources:
Abstract
43P - Assessment of methylation-specific genetic markers for reliable colorectal cancer detection and their potential in liquid biopsy applications
Presenter: Jiri Dvorak
Session: Cocktail & Poster Display session
Resources:
Abstract
44P - Calculated numerical karyotype with ultra low-coverage whole genome sequencing undercovers recurrent chromosomal aberrations in resectable colorectal cancer
Presenter: Thomas Samer Tarawneh
Session: Cocktail & Poster Display session
Resources:
Abstract
46P - Promising epi(genetic) biomarkers for ovarian tumor prognosis
Presenter: Ieva Vaicekauskaitė
Session: Cocktail & Poster Display session
Resources:
Abstract
47P - Integration of miRNA profiles and p53 mutations as biomarkers for predicting sensitivity and resistance to FGFR inhibitor CPL110 in cancer therapy
Presenter: Monika Skupinska
Session: Cocktail & Poster Display session
Resources:
Abstract
48P - Early cancer detection from liquid biopsy using cell-free RNA
Presenter: Joao Curado
Session: Cocktail & Poster Display session
Resources:
Abstract