Abstract 65P
Background
This study describes a six-marker multiplex immunofluorescence (mIF) panel, along with novel marker, LRRC15. Expression in cancer is typically in the stromal compartment. However, in cancers of mesenchymal origin, LRRC15 was also found on tumour cells. Recent studies suggest roles for LRRC15 in invasion and immune modulation. This study demonstrates that mIF paired with machine learning significantly advances our ability to classify and analyse tissue samples from cancer patients.
Methods
A tissue microarray (TMA) of 174 cases of early-stage lung adenocarcinoma with 8 TMA cores from each patient was used for mIF. Tumour cells were distinguished from stromal cells with pan-cytokeratin, while markers for CD68, CD3, αSMA, vimentin, and LRRC15 were used to study immune infiltrates and the stromal compartment. Indica HALO AI image analysis platform was used to classify and analyse mIF images. Density and population of multiple cell phenotypes were then calculated. Classification models were trained and the Kruskal Wallis algorithm was used to rank importance of phenotypes. Kaplan-Meier survival curves were then plotted for highest ranked phenotypes.
Results
Several phenotypes displayed predictors of survival that outperformed previous prognostic scores. Top phenotypes from Kaplan-Meier survival analysis showed that in tumour area, high LRRC15 density predicts poorer 5-year survival in patients (HR: 1.61, 95% CI: 0.956 to 2.72, P=0.044), while high CD68 density predicts better 5-year survival (HR: 0.472, 95% CI: 0.296 to 0.753, P= 0.0006). Furthermore, high CD68 density with LRRC15 exclusion is a more powerful predictor of 5-year survival (HR: 0.444, 95% CI: 0.279 to 0.708, P= 0.0002).
Conclusions
We have demonstrated a mIF and machine learning pipeline that could enhance the performance of survival predictors. Furthermore, understanding LRRC15 in the TME could contribute to precision medicine in lung cancer.
Editorial acknowledgement
Clinical trial identification
Legal entity responsible for the study
University of St Andrews.
Funding
Melville Trust.
Disclosure
All authors have declared no conflicts of interest.
Resources from the same session
163TiP - Single-institution, single-arm, open-label phase II basket study of mutation and/or elevated hedgehog (Hh) expression-directed smoothened inhibitor sonidegib in patients with advanced solid malignancies
Presenter: Madhawa De Silva
Session: Cocktail & Poster Display session
Resources:
Abstract
164TiP - MONSTAR-GLYCO: A multi-institutional prospective study harnessing glycomics and multi-omics on the j-glyconet and SCRUM-MONSTR platform
Presenter: Tadayoshi Hashimoto
Session: Cocktail & Poster Display session
Resources:
Abstract
166P - Unravelling HR-positive, HER2-negative breast cancer and its tumor microenvironment heterogeneity using spatial transcriptomics
Presenter: Bengisu Karakose
Session: Cocktail & Poster Display session
Resources:
Abstract
167P - Cancer neutrophil encyclopedia: A deep dive into antigen-presenting warriors
Presenter: Yingcheng Wu
Session: Cocktail & Poster Display session
Resources:
Abstract
168P - Tumor microenvironment (TME) and PD-L1 expression heterogeneity in high grade serous ovarian cancer (HGSC) samples analysis from the randomized NeoPembrOV/GINECO phase II trial
Presenter: Laetitia Collet
Session: Cocktail & Poster Display session
Resources:
Abstract
169P - Tumour microenvironment in glioblastoma: A single-cell perspective on macrophage dynamics and T cell exhaustion
Presenter: Farasat Kazmi
Session: Cocktail & Poster Display session
Resources:
Abstract
170P - Digital spatial profiling to uncover biomarkers for response prediction in locally advanced gastric cancer patients treated with neoadjuvant chemotherapy
Presenter: Chiara Molinari
Session: Cocktail & Poster Display session
Resources:
Abstract
171P - Immune-modulatory drug profiling using perfused, microfluidic on-chip co-cultures of patient-derived ovarian cancer microtumors and autologous immune cells
Presenter: Sarah Plöger
Session: Cocktail & Poster Display session
Resources:
Abstract
172P - The impact of androgen ablation on the immune landscape in therapy-resistant prostate cancer: Insights from tumour microenvironment analysis
Presenter: Jodi Stewart
Session: Cocktail & Poster Display session
Resources:
Abstract
173P - NRF2 levels in high grade serous ovarian cancer: Characterization and treatment
Presenter: Helen Toma
Session: Cocktail & Poster Display session
Resources:
Abstract