Abstract 191P
Background
Biomarkers are fundamental to oncology, closely tying this practice to that of laboratory medicine. Results are required to be accurate, timely, comprehensive, and comprehendible. External proficiency testing is a key tool in maintaining quality. Traditional schemes test analytic accuracy. Here, we demonstrate the feasibility and utility of a novel end-to-end proficiency testing exercise examining the entire process of biomarker testing.
Methods
Challenge specimens were made using resected colon cancer tissue, each paired with a clinical vignette and distributed to participating labs. Participants were asked to provide all molecular testing required, which could include pre-analytic preparation, immunohistochemistry, gene sequencing, or other methodologies, and to draft and return a final report for each case upon completion. Reports were redistributed to an assessor team including oncologists, who chose therapy based on each lab’s biomarker report. Finally, participants were graded based on their ability to guide oncologists to the most appropriate treatment. Gold standard treatments for each case were decided by assessors prior to the exercise, based on reference results and clinical vignettes.
Results
Eight laboratories participated. Three laboratories were found to have suboptimal results, two leading oncologists to incorrect therapeutic prescriptions (Table) and one withdrawn. Turnaround time ranged from 6-86 days (median 24).
Table: 191P
Resulting number of medical oncologist assessors prescribing the optimal treatment choice based on reported results
Lab ID | ||||||||
Sample ID | 2 | 3 | 4 | 5 | 6 | 7 | 8 | Gold Standard Treatment |
1 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | Immune Checkpoint Inhibitor |
2 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | Anti-EGFR mAb |
3 | 3 | 2 | 2 | 3 | 2 | 2 | 3 | BRAF Inhibitor + Anti-EGFR mAb |
Turnaround Time (Days) | 24 | 63 | 86 | 20 | 29 | 21 | 6 | 14 Days |
Conclusions
This is the first report of end-to-end proficiency testing, providing valuable insights into biomarker quality beyond analytic accuracy, including specimen management, communication, and turnaround time. Here, significant quality gaps were identified, generating opportunities for improvement. This paradigm shift in quality assurance to focus on the complete specimen journey is a promising tool in assessing and improving modern cancer care.
Clinical trial identification
Editorial acknowledgement
Legal entity responsible for the study
Canadian Pathology Quality Assurance - Assurance qualité canadienne en pathologie (CPQA-AQCP).
Funding
Canadian Pathology Quality Assurance - Assurance Qualité en Pathologie Canadienne (CPQA-AQPC) with funding from Pfizer.
Disclosure
M.D. Carter: Financial Interests, Personal and Institutional, Other, Honoraria: Amgen, Bayer, Merck, Novartis, Pfizer, Incyte. S. Dudani: Financial Interests, Personal and Institutional, Advisory Board: Bristol Myers Squibb, Eisai, Ipsen, Merck, Pfizer, Taiho; Financial Interests, Personal and Institutional, Other, Honoraria: AstraZeneca, Ipsen, Merck, Pfizer. J.M. Loree: Financial Interests, Personal and Institutional, Other, Consulting: Ipsen, Novartis, Amgen, SAGA Diagnostics, Taiho; Financial Interests, Personal and Institutional, Research Grant: Foundation Medicine, Amgen, Ipsen, Personalis. S. Snow: Financial Interests, Personal and Institutional, Other, Advisory Boards/Consulting: Amgen, Bayer, BeiGene, Boehringer Ingelheim, Astellas, AstraZeneca, BMS, Janssen, Knight, Lilly, Merck, MSD, Novartis, Pfizer, Roche, Sanofi, Taiho, Takeda; Financial Interests, Personal and Institutional, Member of Board of Directors: Lung Cancer Canada; Financial Interests, Institutional, Other, Research Trials (Institutional Funding): Amgen, AstraZeneca, BMS, Merck, Novartis, Sanofi. S. Yip: Financial Interests, Personal and Institutional, Advisory Board: Amgen, AstraZeneca, Bayer, Incyte, Pfizer, Roche. B.S. Sheffield: Financial Interests, Personal and Institutional, Other, Consulting/Advisory Boards/Honoraria/Research Support: Amgen, AstraZeneca, Bayer, Biocartis, Boehringer Ingelheim, Cell Marque, Elevation Oncology, Eli Lily, EMD Serono, Incyte, Janssen, Merck, Novartis, Pfizer, Roche, ThermoFisher, Turning Point Therapeutics. All other authors have declared no conflicts of interest.
Resources from the same session
217P - Clinical and molecular features of PTCH1 mutant in solid tumors
Presenter: Xuezheng Li
Session: Poster session 01
218P - Peripheral T cell activation phenotype is associated with clinical outcomes and immune-related adverse events of ipilimumab-nivolumab in advanced hepatocellular carcinoma
Presenter: WON SUK LEE
Session: Poster session 01
219P - Multicentric evaluation of amplicon-based next-generation sequencing solution for local comprehensive molecular tumor profiling
Presenter: Eloisa Jantus Lewintre
Session: Poster session 01
220P - Biomarker of blood age and inflammation in older cancer patients might predict outcome
Presenter: Marcus Vetter
Session: Poster session 01
221P - Peripheral T cell activation phenotype predicts clinical outcomes of atezolizumab-bevacizumab therapy in unresectable hepatocellular carcinoma
Presenter: Chan Kim
Session: Poster session 01
222P - Therapeutic opportunities for porcupine inhibition in gastrointestinal cancer
Presenter: Natalie Cook
Session: Poster session 01
223P - Artificial intelligence-based pathomics biomarker predict primary resistance to first-line treatment in metastatic colorectal cancers
Presenter: Gianluca Mauri
Session: Poster session 01
224P - Germline HLA-I/II is not associated with clinical outcome but the absence of HLA-A01 or the presence of HLA-B27 supertypes were correlated with improved clinical outcome among patients with NSCLC treated with pembrolizumab in combination with chemotherapy
Presenter: Afaf Abed
Session: Poster session 01
225P - Utility of next-generation sequencing (NGS) in patients with advanced cancer in a low-middle income country
Presenter: Milton Lombana Quinonez
Session: Poster session 01
226P - LongiBloodImmunoM: A multi-step analysis pipeline for longitudinal blood-based immunomonitoring for immunotherapy clinical trial
Presenter: Jiangfeng Ye
Session: Poster session 01