Abstract 98P
Background
Lung cancer represents the leading cause of cancer-related death worldwide, with non-small cell lung cancer (NSCLC) accounting for ∼85% of total cases. Although immunotherapy using immune checkpoint inhibitors (ICI) has shown promising results, only a subset of patients benefits from it and there is an urgent need for reliable predictive response biomarkers. Furthermore, traditional tissue biopsies are limited in size and provide a biased representation of the tumour. Therefore, we aimed to explore the possibility to obtain predictive biomarkers of response to ICI in a non-invasive way using liquid biopsy (LB).
Methods
To counter this, we analysed samples from 25 patients from advanced NSCLC treated with pembrolizumab at first line. Blood and tissue samples were collected at baseline to obtain cell-free DNA (cfDNA) and genomic DNA from plasma and PBMCs respectively, and tumour DNA from FFPE primary tumour. All samples underwent a target NGS panel to call somatic mutations in circulating tumour DNA (ctDNA) and primary tumour, evaluating their potential as predictive biomarkers.
Results
Through the integration of three different bioinformatic approaches for variant calling and ROC curve analysis, we identified mutations in key cancer-related genes associated with a 3-month radiological response. We also assessed a promising mutational signature in ctDNA comprising 10 genes with a high ability to predict response to ICI (AUC = 0.98). Although we explored copy number alterations and tumour mutational burden in LB, results did not yield statistical significance, suggesting that assessment of point mutations in particular genes and the proposed signature hold higher potential as biomarkers. Moreover, we compared ctDNA analysis with tissue biopsies, revealing a high concordance between ctDNA and primary tumour, enhancing the reliability of ctDNA analysis as a good alternative for tumour assessment.
Conclusions
These findings highlight the value of ctDNA analysis as a non-invasive predictive biomarker for ICI response and its correlation with mutations found in primary tumours. We also proposed a mutational signature to predict response at baseline for advanced NSCLC ICI treated patients, which could be readily implemented in the clinical management of the disease.
Editorial acknowledgement
Clinical trial identification
Legal entity responsible for the study
Translational Molecular Oncology Unit. IIS Galicia Sur.
Funding
Vigo Contra el Cáncer; GAIN; Xunta de Galicia (ED481A-2020/214); Miguel Servet program (CP20/00188).
Disclosure
All authors have declared no conflicts of interest.
Resources from the same session
41P - HLA genotypes modify the age-related penetrance of BRCA1 pathogenic variants in breast cancer patients
Presenter: Ekaterina Kuligina
Session: Cocktail & Poster Display session
Resources:
Abstract
42P - Investigating the influence of extrachromosomal DNA in the progression of non-small cell lung cancer through the TRACERx and PEACE studies
Presenter: Jeanette Kittel
Session: Cocktail & Poster Display session
Resources:
Abstract
43P - MDM2 alterations in primary brain tumors: A potential niche for targeted therapy
Presenter: Diego Gomez Puerto
Session: Cocktail & Poster Display session
Resources:
Abstract
44P - Exploring miR-205 and miR-296 as salivary biomarkers and potential therapeutic targets in oral cancer
Presenter: Thaís Moré Milan
Session: Cocktail & Poster Display session
Resources:
Abstract
45P - Integrative analysis of TCGA DNA methylation, RNA-sequencing, and variant dataset using machine learning in predicting endometrial cancer recurrence
Presenter: Jinhwa Hong
Session: Cocktail & Poster Display session
Resources:
Abstract
46P - The role of microRNA-1246 in early detection of breast cancer: Findings from a systematic review and meta-analysis
Presenter: Muhammed Elfaituri
Session: Cocktail & Poster Display session
Resources:
Abstract
47P - Differential expression of discriminative markers in matched invasion fronts and tumour buds in CRC
Presenter: Laura Grech
Session: Cocktail & Poster Display session
Resources:
Abstract
48P - Transcriptome profiling highlights distinct gene signatures in HER2 high (HER2 3+) and HER 2 low (Her2 1+/2+) breast cancers
Presenter: Tamanna Thakur
Session: Cocktail & Poster Display session
Resources:
Abstract
49P - MiR-155 promotes breast cancer progression by upregulating cancer stemness
Presenter: Jeonghee Han
Session: Cocktail & Poster Display session
Resources:
Abstract
50P - Clinical impact of actionable molecular variants disclosed in late-stage cancer patients by tumor whole-exome sequencing in a prospective single-institution study
Presenter: Christophe Mapendano
Session: Cocktail & Poster Display session
Resources:
Abstract