Abstract 151P
Background
Response to neoadjuvant chemoradiation therapy (nCRT) in rectal cancer is variable. Prediction for response to nCRT will allow to select rectal cancer patients who would or would not benefit from nCRT, providing adequate treatment options for locally advanced rectal cancer patients. Recent studies have indicated immunomicroenvironment has relevance to tumor behavior including response to radio- or chemo-treatment. In the present study, we aimed to examine the putative role of the immunomicroenvironment in mediating differential nCRT response in rectal cancer patients and to develop a biomarker model for predicting response to nCRT using immune-related gene expression.
Methods
Expression profiling of 770 immune-related genes was performed in 47 rectal cancer tissues before nCRT. Tumors were screened for predictive biomarkers using the NanoString nCounter platform for digital gene expression analysis with the PanCancer Immune Profiling panel. A genetic model was generated for the prediction of response to nCRT.
Results
Genes associated with the function of T-cell, NK cell, and macrophage were significantly differentially expressed between good and poor responders. Complement pathway components and chemokines were also associated with response to nCRT. Higher expression of FOXJ1, IL7RB, LGALS3, MAP2K2, SH2D1B, and ZC3H14 was significantly associated with pathologic complete response. To discriminate between good and poor responders, we developed a predictive model composed of TNFRSR10B, TCF7, TLR4, SH2D1B, AGK, TBX21, CCL25, IL17RB, ZNF346, and CREB5 using machine learning methods. This model predicted treatment response with good performance in internal validation test (accuracy: 0.8182).
Conclusions
Our results suggest that response to nCRT in rectal cancer is associated with gene expression patterns related to the immunomicroenvironment. We developed a predictive model composed of immune-related genes that allowed the prediction of rectal cancer response to nCRT.
Editorial acknowledgement
This work was supported by the National Research Foundation of Korea(NRF) grant funded by the Korea government. (No. 2020R1F1A1076367)
Clinical trial identification
Legal entity responsible for the study
The authors.
Funding
This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government. (No. 2020R1F1A1076367).
Disclosure
All authors have declared no conflicts of interest.
Resources from the same session
41P - HLA genotypes modify the age-related penetrance of BRCA1 pathogenic variants in breast cancer patients
Presenter: Ekaterina Kuligina
Session: Cocktail & Poster Display session
Resources:
Abstract
42P - Investigating the influence of extrachromosomal DNA in the progression of non-small cell lung cancer through the TRACERx and PEACE studies
Presenter: Jeanette Kittel
Session: Cocktail & Poster Display session
Resources:
Abstract
43P - MDM2 alterations in primary brain tumors: A potential niche for targeted therapy
Presenter: Diego Gomez Puerto
Session: Cocktail & Poster Display session
Resources:
Abstract
44P - Exploring miR-205 and miR-296 as salivary biomarkers and potential therapeutic targets in oral cancer
Presenter: Thaís Moré Milan
Session: Cocktail & Poster Display session
Resources:
Abstract
45P - Integrative analysis of TCGA DNA methylation, RNA-sequencing, and variant dataset using machine learning in predicting endometrial cancer recurrence
Presenter: Jinhwa Hong
Session: Cocktail & Poster Display session
Resources:
Abstract
46P - The role of microRNA-1246 in early detection of breast cancer: Findings from a systematic review and meta-analysis
Presenter: Muhammed Elfaituri
Session: Cocktail & Poster Display session
Resources:
Abstract
47P - Differential expression of discriminative markers in matched invasion fronts and tumour buds in CRC
Presenter: Laura Grech
Session: Cocktail & Poster Display session
Resources:
Abstract
48P - Transcriptome profiling highlights distinct gene signatures in HER2 high (HER2 3+) and HER 2 low (Her2 1+/2+) breast cancers
Presenter: Tamanna Thakur
Session: Cocktail & Poster Display session
Resources:
Abstract
49P - MiR-155 promotes breast cancer progression by upregulating cancer stemness
Presenter: Jeonghee Han
Session: Cocktail & Poster Display session
Resources:
Abstract
50P - Clinical impact of actionable molecular variants disclosed in late-stage cancer patients by tumor whole-exome sequencing in a prospective single-institution study
Presenter: Christophe Mapendano
Session: Cocktail & Poster Display session
Resources:
Abstract