Abstract 151P
Background
Response to neoadjuvant chemoradiation therapy (nCRT) in rectal cancer is variable. Prediction for response to nCRT will allow to select rectal cancer patients who would or would not benefit from nCRT, providing adequate treatment options for locally advanced rectal cancer patients. Recent studies have indicated immunomicroenvironment has relevance to tumor behavior including response to radio- or chemo-treatment. In the present study, we aimed to examine the putative role of the immunomicroenvironment in mediating differential nCRT response in rectal cancer patients and to develop a biomarker model for predicting response to nCRT using immune-related gene expression.
Methods
Expression profiling of 770 immune-related genes was performed in 47 rectal cancer tissues before nCRT. Tumors were screened for predictive biomarkers using the NanoString nCounter platform for digital gene expression analysis with the PanCancer Immune Profiling panel. A genetic model was generated for the prediction of response to nCRT.
Results
Genes associated with the function of T-cell, NK cell, and macrophage were significantly differentially expressed between good and poor responders. Complement pathway components and chemokines were also associated with response to nCRT. Higher expression of FOXJ1, IL7RB, LGALS3, MAP2K2, SH2D1B, and ZC3H14 was significantly associated with pathologic complete response. To discriminate between good and poor responders, we developed a predictive model composed of TNFRSR10B, TCF7, TLR4, SH2D1B, AGK, TBX21, CCL25, IL17RB, ZNF346, and CREB5 using machine learning methods. This model predicted treatment response with good performance in internal validation test (accuracy: 0.8182).
Conclusions
Our results suggest that response to nCRT in rectal cancer is associated with gene expression patterns related to the immunomicroenvironment. We developed a predictive model composed of immune-related genes that allowed the prediction of rectal cancer response to nCRT.
Editorial acknowledgement
This work was supported by the National Research Foundation of Korea(NRF) grant funded by the Korea government. (No. 2020R1F1A1076367)
Clinical trial identification
Legal entity responsible for the study
The authors.
Funding
This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government. (No. 2020R1F1A1076367).
Disclosure
All authors have declared no conflicts of interest.
Resources from the same session
103P - MSI detection by NGS using tumor samples and liquid biopsy for patients with solid tumors: A single institution experience
Presenter: Alexandra Lebedeva
Session: Cocktail & Poster Display session
Resources:
Abstract
104P - Hypomethylated immune gene promoters as potential biomarkers in oral and oropharyngeal cancer
Presenter: Petra Anić
Session: Cocktail & Poster Display session
Resources:
Abstract
105P - Implementation of technical improvements in cfMeDIP-Seq library preparation
Presenter: Martina Dameri
Session: Cocktail & Poster Display session
Resources:
Abstract
106P - Clinical application of next-generation sequencing in metastatic colorectal cancer (mCRC): Experience from a comprehensive cancer centre
Presenter: David Lluís Garulo
Session: Cocktail & Poster Display session
Resources:
Abstract
107P - Unveiling mismatch repair deficiency (dMMR) and microsatellite-instability high (MSI-H) detection in cancer patients (pt) using a next-generation sequencing (NGS)-based molecular pre-screening program (MPP)
Presenter: Lucia Notario Rincon
Session: Cocktail & Poster Display session
Resources:
Abstract
108P - Validation and implementation of a large NGS panel to test liquid biopsies from patients with suspected advanced non-small cell lung cancer (NSCLC) in an NHS genomic laboratory for the QuicDNA biomarker study
Presenter: Rachel Dodds
Session: Cocktail & Poster Display session
Resources:
Abstract
109P - A multiomic, single-cell measurable residual disease (scMRD) assay for phasing DNA mutations and surface immunophenotypes
Presenter: Simone Formisano
Session: Cocktail & Poster Display session
Resources:
Abstract
110P - Multicellular three-dimensional tumor spheroid of nasopharyngeal carcinoma
Presenter: Shiau Chuen Cheah
Session: Cocktail & Poster Display session
Resources:
Abstract
111P - Development of digital PCR for accurate measurement of HER2 amplification in 184 gastric cancer patients
Presenter: So Young Kang
Session: Cocktail & Poster Display session
Resources:
Abstract
112P - A novel methylation-sensitive assay for early detection of hepatocellular carcinoma to improve surveillance
Presenter: Jeong Sil Ha
Session: Cocktail & Poster Display session
Resources:
Abstract